HPLC-UV Method Development for Highly Polar Impurities

Overcoming the Challenge of Highly Polar Impurity Analysis in Drug Products

When Standard Methods Fail: A Critical Analytical Challenge

Pharmaceutical companies face increasing pressure to detect and quantify impurities that can impact drug product stability and patient safety. When these impurities are highly polar compounds, they present unique analytical challenges that standard HPLC methods often cannot resolve.

The Problem:
An Impurity Hidden in Plain Sight

A company’s analytical team identified an impurity growing in their drug product: Impurity X was flagged as a potential genotoxic impurity which was growing on stability in their drug product. 

This wasn’t just a minor issue, since impurity growth posed a high risk to the product release and regulatory approval.

The challenge was intensified by the impurity’s chemical nature:

  • Impurity X exhibited extreme polarity
  • Poor retention on the HPLC column caused it to elute at the solvent front
  • The existing analytical method couldn’t distinguish it from other early-eluting compounds
  • Co-elution with other components prevented accurate quantification
  • Without resolution and quantification, it was impossible to determine if impurity levels were within acceptable limits of the specification

The risks were high: inadequate analytical methods mean delayed product release, potential regulatory setbacks, and ultimately, delayed patient access to essential medications.

Determination of Highly Polar Impurities in Drug Products
The Resolian Approach: Expert Method Development

THE RESOLIAN APPROACH:
EXPERT METHOD DEVELOPMENT

The client needed our analytical expertise to overhaul and redevelop the insufficient method into a robust and validated solution.

Resolian’s analytical science team approached the challenge systematically, applying extensive knowledge of chromatographic principles and method development for challenging polar compounds:

Method Development Phase
Our scientists explored multiple chromatographic variables to achieve retention and separation of highly polar compounds:

  • Column chemistry optimisation
  • Mobile phase composition adjustments
  • pH and buffer system evaluation
  • Gradient profile refinement

Method Optimisation Phase
Once initial separation was achieved, the method underwent rigorous optimisation to ensure:

  • Baseline resolution of all critical components
  • Peak purity confirmation
  • MS compatibility for structural confirmation
  • Method Robustness

Method Validation Phase
The optimised method was validated to GMP standards, ensuring it met all regulatory requirements for pharmaceutical quality control.

THE RESULTS:
From Inadequate to Compliant

The new validated method addressed all the customer concerns. 

Where the original method provided incomplete information, the Resolian method delivered the complete quantification of Impurity X:

ParameterOriginal MethodResolian Method
Impurity X ResolutionNot resolvedBaseline resolved
Impurities Separated2 (including X)5 (including X)
Impurity X Retention Time Eluting at solvent frontWell Resolved from the solvent front
Peak PurityNot pure (co-elution)Pure
MS CompatibilityYesYes

The impact of the new method design provided:

  • Regulatory confidence:
    A validated, robust method that meets GMP requirements
  • Stability program success:
    Accurate trending of impurity growth over time
  • Product release capability:
    Clear, quantifiable impurity data for quality decision-making
  • Extended method ability:
    A method that separates not just Impurity X, but other components previously undetected that could pose future challenges
Figure 1
Figure 2

Why Polar Compounds Require Specialised Expertise

Highly polar impurities represent one of the most challenging areas of pharmaceutical analysis.

These molecules:

  • Exhibit weak interaction with traditional reversed-phase columns
  • Often require specialised stationary phases or mobile phase conditions
  • Can co-elute with solvent fronts, masking critical quality attributes
  • May require unique detection strategies for accurate quantification

Developing methods for these compounds isn’t simply about following a protocol – it requires deep understanding of chromatographic theory, extensive experience with challenging separations, and the analytical creativity to find solutions when standard approaches fail.

Your Analytical Challenges Deserve Expert Solutions

Is your team struggling with:

  • Polar impurities that won’t retain on your column?
  • Methods that worked in development but fail during stability studies?
  • Impurities retained in the solvent front or co-eluting with other components?
  • Regulatory concerns about your analytical methods?

Resolian’s analytical science team specialises in solving complex separation challenges. From Drug Products to other difficult-to-analyse molecules, we bring the expertise to develop, optimise, and validate methods that deliver the analytical confidence you need.

Our Analytical Scientific Services include:

  • Advanced Method Development (GMP method development and validation)
  • Complex Sample Preparation Expertise
  • Forced Degradation Studies
  • Regulatory-Ready Method Validation
  • Method Transfer & Feasibility Studies
  • Analytical Troubleshooting & Redevelopment
  • Routine Testing & Physicochemical Analysis
  • Complex separation problem-solving
  • Impurity identification and quantification
  • High resolution MS and structural elucidation
  • Stability-indicating method development
  • MS-compatible method design
  • Regulatory-compliant analytical packages

Ready to Solve Your Analytical Challenges?

Don’t let inadequate analytical methods compromise your product development timeline or regulatory strategy.

Contact Resolian today to discuss how our analytical sciences team can provide the expertise and solutions you need.

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Zhiyang Zhao, Ph.D.

Chief Scientific Officer

Zhiyang Zhao, Ph.D., serves as Chief Scientific Officer (CSO) at Resolian. Dr. Zhao has over 30 years of pharmaceutical industry experience with special focus on drug metabolism and bioanalysis of small and large molecules in drug discovery and development. Dr. Zhao has previously held positions at Pfizer, GlaxoSmithKline, and Amgen. Before joining Resolian in 2015, Dr. Zhao served as Site Director of Preclinical Research at Amgen in Cambridge, Massachusetts, for over a decade. 

Currently, Dr. Zhao serves as an Adjunct Professor at the Eshelman School of Pharmacy of the University of North Carolina at Chapel Hill, North Carolina, and as Editor-in-Chief of Drug Metabolism & Bioanalysis Letters, a journal by Bentham Science, which publishes in all areas of drug metabolism and bioanalysis. Dr. Zhao received his Ph.D. degree in Medicinal Chemistry from Virginia Polytechnic and State University (popularly known as Virginia Tech) in Blacksburg, Virginia. 

 

Patrick Bennett

Chief Executive Officer

Patrick Bennett has over 35 years of experience in pharmaceutical analysis and laboratory management. Now Chief Business Officer at Resolian, Patrick’s experience includes the roles of Strategic Marketing Director for Pharma with Thermo Fisher Scientific, LabCorp, and Vice President of Strategy and Development with PPD. 

Patrick earned a B.S. degree in Toxicology and a M.S. degree in Pharmacology from the College of Pharmacy and Allied Health at St. John’s University and an M.B.A in International Marketing from the Martin J. Whitman School of Management at Syracuse University.